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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "rrnni" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'rrnni: Manipulate with RNNI Tree Space'
version: 0.1.1
doi: 10.32614/CRAN.package.rrnni
abstract: 'Calculate RNNI distance between and manipulate with ranked trees. RNNI
  stands for Ranked Nearest Neighbour Interchange and is an extension of the classical
  NNI space (space of trees created by the NNI moves) to ranked trees, where internal
  nodes are ordered according to their heights (usually assumed to be times). The
  RNNI distance takes the tree topology into account, as standard NNI does, but also
  penalizes changes in the order of internal nodes, i.e. changes in the order of times
  of evolutionary events. For more information about the RNNI space see: Gavryushkin
  et al. (2018) <https://doi.org/10.1007/s00285-017-1167-9>, Collienne & Gavryushkin
  (2021) <https://doi.org/10.1007/s00285-021-01567-5>, Collienne et al. (2021) <https://doi.org/10.1007/s00285-021-01685-0>,
  and Collienne (2021) <http://hdl.handle.net/10523/12606>.'
authors:
- family-names: Moravec
  given-names: Jiří C.
  email: jiri.c.moravec@gmail.com
- family-names: Collienne
  given-names: Lena
  email: lena@lenacoll.de
repository: https://biods.r-universe.dev
repository-code: https://github.com/biods/rrnni
commit: aee39362aa355fd56c0c6ac725b1a2a560f43570
url: https://rrnni.biods.org/
date-released: '2023-08-26'
contact:
- family-names: Moravec
  given-names: Jiří C.
  email: jiri.c.moravec@gmail.com