{ "_id": "6a1ef60eb401979e73416ff8", "Package": "rrnni", "Title": "Manipulate with RNNI Tree Space", "Version": "0.1.1", "Date": "2023-08-26", "Authors@R": "c(person(\nc(\"Jiří\", \"C.\"), \"Moravec\",\nemail = \"jiri.c.moravec@gmail.com\",\nrole = c(\"aut\", \"cre\")\n),\nperson(\n\"Lena\", \"Collienne\",\nemail = \"lena@lenacoll.de\",\nrole = c(\"aut\")\n))", "Description": "Calculate RNNI distance between and manipulate with ranked\ntrees. RNNI stands for Ranked Nearest Neighbour Interchange and\nis an extension of the classical NNI space (space of trees\ncreated by the NNI moves) to ranked trees, where internal nodes\nare ordered according to their heights (usually assumed to be\ntimes). The RNNI distance takes the tree topology into account,\nas standard NNI does, but also penalizes changes in the order\nof internal nodes, i.e. changes in the order of times of\nevolutionary events. For more information about the RNNI space\nsee: Gavryushkin et al. (2018) ,\nCollienne & Gavryushkin (2021)\n, Collienne et al. (2021)\n, and Collienne (2021)\n.", "License": "GPL (>= 3)", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.2.3", "Config/testthat/edition": "3", "URL": "https://rrnni.biods.org/", "BugReports": "https://github.com/biods/rrnni/issues", "Repository": "https://biods.r-universe.dev", "Date/Publication": "2023-08-25 13:18:51 UTC", "RemoteUrl": "https://github.com/biods/rrnni", "RemoteRef": "HEAD", "RemoteSha": "aee39362aa355fd56c0c6ac725b1a2a560f43570", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-05-19 06:39:46 UTC", "User": "root" }, "Author": "Jiří C. Moravec [aut, cre],\nLena Collienne [aut]", "Maintainer": "Jiří C. 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